全部搜索项
buster  ] [  bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ 源代码: idba  ]

软件包:idba(1.1.3-8 以及其他的)

idba 的相关链接

Screenshot

Debian 的资源:

下载源码包 idba

维护小组:

外部的资源:

相似软件包:

iterative De Bruijn Graph short read assemblers

IDBA stands for iterative de Bruijn graph assembler. In computational sequence biology, an assembler solves the puzzle coming from large sequencing machines that feature many gigabytes of short reads from a large genome.

This package provides several flavours of the IDBA assembler, as they all share the same source tree but serve different purposes and evolved over time.

IDBA is the basic iterative de Bruijn graph assembler for second-generation sequencing reads. IDBA-UD, an extension of IDBA, is designed to utilize paired-end reads to assemble low-depth regions and use progressive depth on contigs to reduce errors in high-depth regions. It is a generic purpose assembler and especially good for single-cell and metagenomic sequencing data. IDBA-Hybrid is another update version of IDBA-UD, which can make use of a similar reference genome to improve assembly result. IDBA-Tran is an iterative de Bruijn graph assembler for RNA-Seq data.

其他与 idba 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • 增强

下载 idba

下载可用于所有硬件架构的
硬件架构 版本 软件包大小 安装后大小 文件
alpha (非官方移植版) 1.1.3-8 637.0 kB4,571.0 kB [文件列表]
amd64 1.1.3-8 627.6 kB4,037.0 kB [文件列表]
arm64 1.1.3-8 585.5 kB3,797.0 kB [文件列表]
armel 1.1.3-8 565.6 kB3,793.0 kB [文件列表]
armhf 1.1.3-8 575.0 kB3,089.0 kB [文件列表]
hppa (非官方移植版) 1.1.3-8 657.6 kB4,317.0 kB [文件列表]
i386 1.1.3-8 672.0 kB4,261.0 kB [文件列表]
ia64 (非官方移植版) 1.1.3-8 718.5 kB6,920.0 kB [文件列表]
mips64el 1.1.3-8 644.8 kB4,896.0 kB [文件列表]
ppc64 (非官方移植版) 1.1.3-8 642.1 kB4,821.0 kB [文件列表]
ppc64el 1.1.3-8 652.4 kB4,757.0 kB [文件列表]
riscv64 1.1.3-8+b1 635.5 kB3,458.0 kB [文件列表]
s390x 1.1.3-8 599.5 kB4,293.0 kB [文件列表]
sparc64 (非官方移植版) 1.1.3-8 563.9 kB5,733.0 kB [文件列表]
x32 (非官方移植版) 1.1.3-8 623.6 kB3,837.0 kB [文件列表]