Package: python3-cyvcf2 (0.32.0-1)

[ Source: cyvcf2  ]

VCF parser based on htslib (Python 3)

This modules allows fast parsing of VCF and BCF including region-queries with Python. This is essential for efficient analyses of nucleotide variation with Python on high-throughput sequencing data.

cyvcf2 is a cython wrapper around htslib. Attributes like variant.gt_ref_depths return a numpy array directly so they are immediately ready for downstream use.

This package installs the library for Python 3.

Other Packages Related to python3-cyvcf2

• dep: libc6 (>= 2.38)

  Libreria C GNU: librerie condivise
  also a virtual package provided by libc6-udeb

• dep: libhts3t64 (>= 1.17)

  libreria C per formati di dati di sequenziamento ad alte prestazioni

• dep: python3

  linguaggio interattivo di alto livello orientato agli oggetti (versione python3 predefinita)

  dep: python3 (<< 3.15)

  dep: python3 (>= 3.13~)

• dep: python3-click

  kit per la creazione di interfacce a riga di comando - Python 3.x

• dep: python3-coloredlogs

  output colorato su terminale per il modulo logging di Python 3

• dep: python3-numpy

  libreria Python per calcoli numerici (Python 3)

• dep: python3-numpy2-abi0

  virtual package provided by python3-numpy

  or python3-numpy-abi9

  Package not available

Download python3-cyvcf2

Download for all available architectures

Architecture	Package Size	Installed Size	Files
amd64	1,028.0 kB	6,309.0 kB	[list of files]
arm64	968.6 kB	6,263.0 kB	[list of files]
armhf	988.1 kB	5,795.0 kB	[list of files]
i386	995.7 kB	6,379.0 kB	[list of files]
ppc64el	999.8 kB	6,583.0 kB	[list of files]
riscv64	1,021.7 kB	5,945.0 kB	[list of files]
s390x	1,012.1 kB	6,303.0 kB	[list of files]