Paket: flye (2.9.3+dfsg2-1)

[ Kaynak: flye  ]

de novo assembler for single molecule sequencing reads using repeat graphs

Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The package represents a complete pipeline: it takes raw PacBio / ONT reads as input and outputs polished contigs. Flye also has a special mode for metagenome assembly.

flye ile İlgili Diğer Paketler

• dep: libc6 (>= 2.34) [alpha, ia64 değil]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [alpha, ia64, riscv64 değil]

  GCC support library

  dep: libgcc-s1 (>= 3.4) [alpha, riscv64]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: minimap2

  versatile pairwise aligner for genomic and spliced nucleotide sequences

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-six

  Python 2 and 3 compatibility library

• dep: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

flye indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
alpha (resmi olmayan port)	22.589,8 kB	37.051,0 kB	[dosya listesi]
amd64	22.636,3 kB	36.913,0 kB	[dosya listesi]
arm64	22.561,7 kB	36.792,0 kB	[dosya listesi]
ia64 (resmi olmayan port)	22.763,6 kB	38.428,0 kB	[dosya listesi]
mips64el	22.557,3 kB	37.103,0 kB	[dosya listesi]
ppc64 (resmi olmayan port)	22.630,0 kB	37.241,0 kB	[dosya listesi]
ppc64el	22.638,2 kB	37.176,0 kB	[dosya listesi]
riscv64	22.615,6 kB	36.508,0 kB	[dosya listesi]
s390x	22.668,3 kB	37.096,0 kB	[dosya listesi]