套件：python3-pairtools（0.3.0-3.2 以及其他的） [debports]

[ 原始碼：  ]

Framework to process sequencing data from a Hi-C experiment

Simple and fast command-line framework to process sequencing data from a Hi-C experiment.

Process pair-end sequence alignments and perform the following operations:

  - Detect ligation junctions (a.k.a. Hi-C pairs) in aligned paired-end
    sequences of Hi-C DNA molecules
  - Sort .pairs files for downstream analyses
  - Detect, tag and remove PCR/optical duplicates
  - Generate extensive statistics of Hi-C datasets
  - Select Hi-C pairs given flexibly defined criteria
  - Restore .sam alignments from Hi-C pairs

其他與 python3-pairtools 有關的套件

• dep: cython3

  C-Extensions for Python 3

• dep: libc6 (>= 2.3.4)

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.12)

  dep: python3 (>= 3.10~)

• dep: python3-click

  Command-Line Interface Creation Kit - Python 3.x

• dep: python3-nose

  套件暫時不可用

• dep: python3-numpy (>= 1:1.20.0)

  Python library for numerical computations (Python 3)

• dep: python3-numpy-abi9

  本虛擬套件由這些套件填實： python3-numpy

下載 python3-pairtools

下載可用於所有硬體架構的

硬體架構	版本	套件大小	安裝後大小	檔案
hppa （非官方移植版）	0.3.0-3.2+b2	144。6 kB	640。0 kB	[檔案列表]