套件：spaln（2.4.1+dfsg-3）

[ 原始碼： spaln  ]

splicing-aware transcript-alignment to genomic DNA

Spaln (space-efficient spliced alignment) is a stand-alone program that maps and aligns a set of cDNA or protein sequences onto a whole genomic sequence in a single job. It also performs spliced or ordinary alignment after rapid similarity search against a protein sequence database, if a genomic segment or an amino acid sequence is given as a query.

spaln supports a combination of protein sequence database and a given genomic segment and performs rapid similarity searches and (semi-)global alignments of a set of protein sequence queries against a protein sequence database. Spaln adopts multi-phase heuristics that makes it possible to perform the job on a conventional personal computer.

其他與 spaln 有關的套件

• dep: libc6 (>= 2.29)

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

• dep: libgcc-s1 (>= 3.3.1) [除 armel, armhf]

  GCC 支援函式庫

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 5)

  GNU Standard C++ Library v3

• dep: spaln-data

  splicing-aware transcript-alignment to genomic DNA (data)

• dep: zlib1g (>= 1:1.2.0.2)

  壓縮函式庫 - 跑程式時用(runtime)

下載 spaln

下載可用於所有硬體架構的

硬體架構	套件大小	安裝後大小	檔案
amd64	345。1 kB	855。0 kB	[檔案列表]
arm64	311。5 kB	775。0 kB	[檔案列表]
armel	296。6 kB	781。0 kB	[檔案列表]
armhf	303。3 kB	589。0 kB	[檔案列表]
i386	349。5 kB	881。0 kB	[檔案列表]
mips64el	330。2 kB	955。0 kB	[檔案列表]
mipsel	323。5 kB	895。0 kB	[檔案列表]
ppc64el	360。1 kB	1，120。0 kB	[檔案列表]
s390x	349。1 kB	1，003。0 kB	[檔案列表]