Package: gmap (2025-07-31+ds-1 and others)

Links for gmap

Debian Resources:

Download Source Package gmap:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Shaun Jackman (QA Page)
Andreas Tille (QA Page)
Alexandre Mestiashvili (QA Page)
Étienne Mollier (QA Page)

External Resources:

Homepage [research-pub.gene.com]

Similar packages:

allineamento tollerante agli SNP e con splicing per mRNA e letture corte

Questo pacchetto contiene i programmi GMAP e GSNAP, oltre ad utilità per gestire database di genomi in formato GMAP/GSNAP. GMAP (Genomic Mapping and Alignment Program) è uno strumento per allineare sequenze di EST, mRNA e cDNA. GSNAP (Genomic Short-read Nucleotide Alignment Program) è uno strumento per allineare letture di trascrittoma a terminali singoli e appaiati. Entrambi gli strumenti possono usare un database di:

 * siti di splicing noti e identificare nuovi siti di splice;
 * polimorfismi a singolo nucleotide (SNP) noti.

GSNAP può allineare DNA trattato con bisolfito.

Tags: Field: Biology, field::biology:bioinformatics, field::biology:structural, Role: Program, Purpose: Analysing

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Download gmap

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	2025-07-31+ds-1	5,331.8 kB	44,665.0 kB	[list of files]
amd64	2025-07-31+ds-1	35,600.9 kB	269,708.0 kB	[list of files]
arm64	2025-07-31+ds-1+b1	6,970.4 kB	61,224.0 kB	[list of files]
armhf	2025-07-31+ds-1	4,889.4 kB	44,881.0 kB	[list of files]
i386	2025-07-31+ds-1	5,133.3 kB	46,585.0 kB	[list of files]
loong64	2025-07-31+ds-1	6,968.3 kB	62,243.0 kB	[list of files]
ppc64el	2025-07-31+ds-1	7,144.1 kB	63,848.0 kB	[list of files]
riscv64	2025-07-31+ds-1	6,331.5 kB	59,216.0 kB	[list of files]
sh4 (unofficial port)	2024-11-20+ds-2	5,697.4 kB	48,642.0 kB	[list of files]
x32 (unofficial port)	2025-07-31+ds-1	5,605.1 kB	47,873.0 kB	[list of files]