Package: phybin (0.3-7)

[ Source: phybin  ]

binning/clustering newick trees by topology

PhyBin is a simple command line tool that classifies a set of Newick tree files by their topology. The purpose of it is to take a large set of tree files and browse through the most common tree topologies.

It can do simple binning of identical trees or more complex clustering based on an all-to-all Robinson-Foulds distance matrix.

phybin produces output files that characterize the size and contents of each bin or cluster (including generating GraphViz-based visual representations of the tree topologies).

Other Packages Related to phybin

• dep: libc6 (>= 2.38)

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

• dep: libffi8 (>= 3.4)

  Foreign Function Interface library runtime

• dep: libgmp10 (>= 2:6.3.0+dfsg)

  Multiprecision arithmetic library

• dep: libnuma1 (>= 2.0.11)

  Libraries for controlling NUMA policy

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Architecture	Package Size	Installed Size	Files
amd64	3,578.3 kB	26,553.0 kB	[list of files]
arm64	3,567.3 kB	29,774.0 kB	[list of files]
armhf	5,186.6 kB	33,521.0 kB	[list of files]
i386	5,314.7 kB	42,376.0 kB	[list of files]
ppc64el	3,464.4 kB	40,666.0 kB	[list of files]
riscv64	4,687.3 kB	32,590.0 kB	[list of files]
s390x	7,118.5 kB	55,881.0 kB	[list of files]