Pakket: phybin (0.3-7)

[ Bron: phybin  ]

binning/clustering newick trees by topology

PhyBin is a simple command line tool that classifies a set of Newick tree files by their topology. The purpose of it is to take a large set of tree files and browse through the most common tree topologies.

It can do simple binning of identical trees or more complex clustering based on an all-to-all Robinson-Foulds distance matrix.

phybin produces output files that characterize the size and contents of each bin or cluster (including generating GraphViz-based visual representations of the tree topologies).

Andere aan phybin gerelateerde pakketten

• dep: libc6 (>= 2.38)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libffi8 (>= 3.4)

  Foreign Function Interface library runtime

• dep: libgmp10 (>= 2:6.3.0+dfsg)

  Multiprecision arithmetic library

• dep: libnuma1 (>= 2.0.11)

  Libraries for controlling NUMA policy

phybin downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	3.578,3 kB	26.553,0 kB	[overzicht]
arm64	3.567,3 kB	29.774,0 kB	[overzicht]
armhf	5.186,6 kB	33.521,0 kB	[overzicht]
i386	5.314,7 kB	42.376,0 kB	[overzicht]
ppc64el	3.464,4 kB	40.666,0 kB	[overzicht]
riscv64	4.687,3 kB	32.590,0 kB	[overzicht]
s390x	7.118,5 kB	55.881,0 kB	[overzicht]