[ Bron: nanopolish ]
Pakket: nanopolish (0.14.0-1 en anderen)
Verwijzigingen voor nanopolish
Debian bronnen:
Het bronpakket nanopolish downloaden:
Beheerders:
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
consensus caller for nanopore sequencing data
Nanopolish uses a signal-level hidden Markov model for consensus calling of nanopore genome sequencing data. It can perform signal-level analysis of Oxford Nanopore sequencing data. Nanopolish can calculate an improved consensus sequence for a draft genome assembly, detect base modifications, call SNPs and indels with respect to a reference genome and more.
Andere aan nanopolish gerelateerde pakketten
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- dep: libc6 (>= 2.23) [sparc64]
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
- dep: libc6 (>= 2.29) [ppc64]
- dep: libc6 (>= 2.34) [niet alpha, ia64, ppc64, sh4, sparc64]
- dep: libc6 (>= 2.37) [sh4]
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- dep: libc6.1 (>= 2.34) [alpha]
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
-
- dep: libgcc-s1 (>= 3.3.1) [amd64, arm64, i386, mips64el, x32]
- GCC support bibliotheek
- dep: libgcc-s1 (>= 3.4) [alpha, riscv64]
- dep: libgcc-s1 (>= 3.4.4) [ppc64, ppc64el]
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
- dep: libgcc-s1 (>= 4.2) [ia64, sh4]
-
- dep: libgcc-s2 (>= 4.2.1) [m68k]
- GCC support bibliotheek
-
- dep: libgcc-s4 (>= 4.1.1) [hppa]
- GCC support bibliotheek
-
- dep: libgcc1 (>= 1:3.4) [sparc64]
- Pakket niet beschikbaar
-
- dep: libgomp1 (>= 4.9) [sparc64]
- GCC OpenMP (GOMP) support library
- dep: libgomp1 (>= 6) [niet sparc64]
-
- dep: libhdf5-100 [sparc64]
- Pakket niet beschikbaar
-
- dep: libhdf5-103-1 [ppc64]
- HDF5 C runtime files - serial version
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- dep: libhdf5-103-1t64 [niet ppc64, sparc64]
- HDF5 C runtime files - serial version
-
- dep: libhts2 [sparc64]
- Pakket niet beschikbaar
-
- dep: libhts3 (>= 1.10) [ppc64]
- C library for high-throughput sequencing data formats
-
- dep: libhts3t64 (>= 1.17) [niet ppc64, sparc64]
- C library for high-throughput sequencing data formats
-
- dep: libslow5-0 (>= 0.5.1) [x32]
- library for reading & writing SLOW5 files
- dep: libslow5-0 (>= 0.5.1+dfsg) [hppa]
-
- dep: libslow5-0t64 (>= 0.5.1) [niet hppa, ppc64, sparc64, x32]
- library for reading & writing SLOW5 files
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- dep: libstdc++6 (>= 13.1) [niet ppc64, sparc64]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 5.2) [sparc64]
- dep: libstdc++6 (>= 9) [ppc64]
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- Larry Wall's Practical Extraction and Report Language
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- dep: python3 [niet sparc64]
- interactive high-level object-oriented language (default python3 version)
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- dep: zlib1g (>= 1:1.1.4) [niet armel, armhf]
- compressiebibliotheek - programma's
- dep: zlib1g (>= 1:1.2.3.3) [armel, armhf]
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- rec: python3-biopython
- Python3 library for bioinformatics
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- rec: python3-pysam
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nanopolish downloaden
| Platform | Versie | Pakketgrootte | Geïnstalleerde grootte | Bestanden |
|---|---|---|---|---|
| alpha (unofficial port) | 0.14.0-1+b1 | 2.133,7 kB | 9.606,0 kB | [overzicht] |
| amd64 | 0.14.0-1+b1 | 2.144,8 kB | 9.343,0 kB | [overzicht] |
| arm64 | 0.14.0-1+b1 | 2.073,9 kB | 9.219,0 kB | [overzicht] |
| armel | 0.14.0-1+b1 | 2.078,6 kB | 9.253,0 kB | [overzicht] |
| armhf | 0.14.0-1+b1 | 2.085,1 kB | 8.861,0 kB | [overzicht] |
| hppa (unofficial port) | 0.14.0-1+b1 | 2.149,1 kB | 9.501,0 kB | [overzicht] |
| i386 | 0.14.0-1+b1 | 2.167,9 kB | 9.413,0 kB | [overzicht] |
| ia64 (unofficial port) | 0.14.0-1+b1 | 2.281,9 kB | 10.820,0 kB | [overzicht] |
| m68k (unofficial port) | 0.14.0-1+b1 | 2.117,9 kB | 9.409,0 kB | [overzicht] |
| mips64el | 0.14.0-1+b1 | 2.105,4 kB | 9.592,0 kB | [overzicht] |
| ppc64 (unofficial port) | 0.13.3-2 | 2.208,6 kB | 9.987,0 kB | [overzicht] |
| ppc64el | 0.14.0-1+b1 | 2.149,2 kB | 9.603,0 kB | [overzicht] |
| riscv64 | 0.14.0-1+b2 | 2.150,1 kB | 9.083,0 kB | [overzicht] |
| sh4 (unofficial port) | 0.14.0-1+b1 | 2.257,1 kB | 9.347,0 kB | [overzicht] |
| sparc64 (unofficial port) | 0.5.0-1+b1 | 1.799,8 kB | 3.490,0 kB | [overzicht] |
| x32 (unofficial port) | 0.14.0-1+b1 | 2.144,4 kB | 9.241,0 kB | [overzicht] |