Package: bedtools (2.31.1+dfsg-2 and others)

[ Source: bedtools  ]

suite di utilità per confrontare tratti genomici

Le utilità BEDTools permettono di affrontare compiti comuni negli studi genomici, come trovare i tratti che si sovrappongono e calcolare la copertura. Le utilità sono largamente basate su quattro formati di file di largo uso: BED, GFF/GTF, VCF e SAM/BAM. Usando BEDTools si possono sviluppare pipe sofisticate che rispondono a domande di ricerca complesse mediante l'uso di svariati BEDTools in un flusso comune.

L'utilità groupBy è distribuita nel pacchetto filo.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Suite, Purpose: use::analysing, use::comparing, Data Conversion, use::filtering, works-with::biological-sequence

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Download bedtools

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	2.31.1+dfsg-2	608.1 kB	2,458.0 kB	[list of files]
amd64	2.31.1+dfsg-2	661.8 kB	2,106.0 kB	[list of files]
arm64	2.31.1+dfsg-2	574.4 kB	2,006.0 kB	[list of files]
armel	2.31.1+dfsg-2	547.2 kB	1,817.0 kB	[list of files]
armhf	2.31.1+dfsg-2	564.5 kB	1,313.0 kB	[list of files]
hppa (unofficial port)	2.31.1+dfsg-2	621.0 kB	1,976.0 kB	[list of files]
i386	2.31.1+dfsg-2	727.9 kB	2,301.0 kB	[list of files]
ia64 (unofficial port)	2.31.1+dfsg-2	796.8 kB	4,272.0 kB	[list of files]
m68k (unofficial port)	2.31.1+dfsg-2	623.5 kB	2,045.0 kB	[list of files]
mips64el	2.31.1+dfsg-2	582.9 kB	2,599.0 kB	[list of files]
ppc64 (unofficial port)	2.31.1+dfsg-2	658.7 kB	2,710.0 kB	[list of files]
ppc64el	2.31.1+dfsg-2	664.1 kB	2,518.0 kB	[list of files]
riscv64	2.31.1+dfsg-2+b2	644.0 kB	1,603.0 kB	[list of files]
s390x	2.31.1+dfsg-2	646.6 kB	2,162.0 kB	[list of files]
sh4 (unofficial port)	2.31.1+dfsg-2	752.8 kB	1,942.0 kB	[list of files]
sparc64 (unofficial port)	2.26.0+dfsg-5	460.9 kB	1,898.0 kB	[list of files]
x32 (unofficial port)	2.31.1+dfsg-2	665.9 kB	2,001.0 kB	[list of files]