软件包：libjellyfish-perl（2.3.1-3 以及其他的）

[ 源代码： jellyfish  ]

count k-mers in DNA sequences (Perl bindings of jellyfish)

JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.

JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.

This package contains the Perl bindings of jellyfish.

标签: 软件开发: Perl 开发, 函数库, 实做语言: implemented-in::c, implemented-in::perl, 角色: 开发用函数库

其他与 libjellyfish-perl 有关的软件包

• dep: libc6 (>= 2.34) [除 ia64]

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• dep: libc6.1 (>= 2.31) [ia64]

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6.1-udeb

• dep: libgcc-s1 (>= 3.0) [除 hppa, ia64]

  GCC 支持库

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC 支持库

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: perl [ia64]

  拉里 沃尔的实用报表提取语言(Perl)

  dep: perl (>= 5.38.2-2) [hppa]

  dep: perl (>= 5.38.2-3.2+b2) [除 hppa, ia64]

• dep: perlapi-5.32.1 [ia64]

  软件包暂时不可用

• dep: perlapi-5.38.2 [除 ia64]

  本虚包由这些包填实： perl-base

下载 libjellyfish-perl

下载可用于所有硬件架构的

硬件架构	版本	软件包大小	安装后大小	文件
amd64	2.3.1-3+b3	55.0 kB	177.0 kB	[文件列表]
arm64	2.3.1-3+b3	49.9 kB	229.0 kB	[文件列表]
hppa （非官方移植版）	2.3.1-2+b1	65.9 kB	219.0 kB	[文件列表]
ia64 （非官方移植版）	2.3.0-12	67.0 kB	299.0 kB	[文件列表]
mips64el	2.3.1-3+b4	48.5 kB	234.0 kB	[文件列表]
ppc64el	2.3.1-3+b4	54.0 kB	229.0 kB	[文件列表]
riscv64	2.3.1-3+b4	54.9 kB	153.0 kB	[文件列表]