Paket: libbifrost-dev (1.3.5-2)

[ Källkod: bifrost  ]

static library and header files for libbifrost

Libbifrost-dev is the development library for the command-line tool bifrost for sequencing that features a broad range of functions, such as indexing, editing, and querying the graph, and includes a graph coloring method that maps each k-mer of the graph to the genomes it occurs in.

 * Build, index, color and query the compacted de Bruijn graph
 * No need to build the uncompacted de Bruijn graph
 * Reads or assembled genomes as input
 * Output graph in GFA (can be visualized with Bandage), FASTA or binary
 * Graph cleaning: short tip clipping, etc.
 * Multi-threaded
 * No parameters to estimate with other tools
 * Exact or approximate k-mer search of queries

Andra paket besläktade med libbifrost-dev

• dep: libbifrost0 (= 1.3.5-2)

  library for parallel construction, indexing and querying of de Bruijn graphs

Hämta libbifrost-dev

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	629,7 kbyte	4.029,0 kbyte	[filförteckning]
arm64	608,6 kbyte	4.021,0 kbyte	[filförteckning]
ppc64el	663,9 kbyte	4.282,0 kbyte	[filförteckning]
riscv64	2.555,7 kbyte	30.133,0 kbyte	[filförteckning]
s390x	661,8 kbyte	4.212,0 kbyte	[filförteckning]