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[ Source: fermi-lite  ]

Package: fml-asm (0.1+git20221215.85f159e-1 and others)

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tool for assembling Illumina short reads in small regions

Fml-asm is a command-line tool for assembling Illumina short reads in regions from 100bp to 10 million bp in size, based on the fermi-lite library. It is largely a light-weight in-memory version of fermikit without generating any intermediate files. It inherits the performance, the relatively small memory footprint and the features of fermikit. In particular, fermi-lite is able to retain heterozygous events and thus can be used to assemble diploid regions for the purpose of variant calling.

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Download fml-asm

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 0.1+git20221215.85f159e-1+b1 69.0 kB212.0 kB [list of files]
amd64 0.1+git20221215.85f159e-1+b1 66.7 kB160.0 kB [list of files]
arm64 0.1+git20221215.85f159e-1+b1 60.5 kB148.0 kB [list of files]
armhf 0.1+git20221215.85f159e-1+b1 66.7 kB147.0 kB [list of files]
hppa (unofficial port) 0.1+git20221215.85f159e-1+b1 80.7 kB193.0 kB [list of files]
i386 0.1+git20221215.85f159e-1+b1 83.7 kB203.0 kB [list of files]
ia64 (unofficial port) 0.1+git20190320.b499514-1+b1 97.3 kB314.0 kB [list of files]
loong64 0.1+git20221215.85f159e-1+b1 63.9 kB212.0 kB [list of files]
m68k (unofficial port) 0.1+git20221215.85f159e-1+b1 70.6 kB163.0 kB [list of files]
ppc64 (unofficial port) 0.1+git20221215.85f159e-1+b1 79.3 kB276.0 kB [list of files]
ppc64el 0.1+git20221215.85f159e-1+b1 78.3 kB212.0 kB [list of files]
riscv64 0.1+git20221215.85f159e-1+b1 71.5 kB132.0 kB [list of files]
s390x 0.1+git20221215.85f159e-1+b1 76.1 kB188.0 kB [list of files]
sh4 (unofficial port) 0.1+git20221215.85f159e-1+b1 91.0 kB211.0 kB [list of files]
sparc64 (unofficial port) 0.1+git20221215.85f159e-1+b1 59.5 kB1,045.0 kB [list of files]
x32 (unofficial port) 0.1+git20221215.85f159e-1+b1 66.8 kB155.0 kB [list of files]