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[ Source: fermi-lite  ]

Package: fml-asm (0.1+git20190320.b499514-1 and others)

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tool for assembling Illumina short reads in small regions

Fml-asm is a command-line tool for assembling Illumina short reads in regions from 100bp to 10 million bp in size, based on the fermi-lite library. It is largely a light-weight in-memory version of fermikit without generating any intermediate files. It inherits the performance, the relatively small memory footprint and the features of fermikit. In particular, fermi-lite is able to retain heterozygous events and thus can be used to assemble diploid regions for the purpose of variant calling.

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Download fml-asm

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 0.1+git20190320.b499514-1+b1 74.7 kB180.0 kB [list of files]
amd64 0.1+git20190320.b499514-1+b1 66.9 kB152.0 kB [list of files]
arm64 0.1+git20190320.b499514-1+b1 61.6 kB148.0 kB [list of files]
armel 0.1+git20190320.b499514-1+b1 65.9 kB159.0 kB [list of files]
armhf 0.1+git20190320.b499514-1+b1 66.6 kB119.0 kB [list of files]
hppa (unofficial port) 0.1+git20190320.b499514-1+b1 82.6 kB201.0 kB [list of files]
i386 0.1+git20190320.b499514-1+b1 83.4 kB199.0 kB [list of files]
m68k (unofficial port) 0.1+git20190320.b499514-1+b1 71.1 kB163.0 kB [list of files]
mips64el 0.1+git20190320.b499514-1+b1 69.3 kB180.0 kB [list of files]
mipsel 0.1+git20190320.b499514-1+b1 82.8 kB203.0 kB [list of files]
ppc64 (unofficial port) 0.1+git20190320.b499514-1+b1 79.0 kB276.0 kB [list of files]
ppc64el 0.1+git20190320.b499514-1+b1 77.1 kB212.0 kB [list of files]
riscv64 (unofficial port) 0.1+git20190320.b499514-1+b1 65.2 kB116.0 kB [list of files]
s390x 0.1+git20190320.b499514-1+b1 63.2 kB168.0 kB [list of files]
sh4 (unofficial port) 0.1+git20190320.b499514-1+b1 92.8 kB151.0 kB [list of files]
sparc64 (unofficial port) 0.1+git20190320.b499514-1+b1 60.0 kB149.0 kB [list of files]
x32 (unofficial port) 0.1+git20190320.b499514-1+b1 66.5 kB151.0 kB [list of files]