Package: sibelia (3.0.7+dfsg-4)

[ Source: sibelia  ]

Experimental package

Warning: This package is from the experimental distribution. That means it is likely unstable or buggy, and it may even cause data loss. Please be sure to consult the changelog and other possible documentation before using it.

comparative genomics tool

Sibelia (Synteny Block ExpLoration tool) is a comparative genomics tool: It assists biologists in analysing the genomic variations that correlate with pathogens, or the genomic changes that help microorganisms adapt in different environments. Sibelia will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms.

Sibelia is useful in finding:

 1) shared regions,
 2) regions that present in one group of genomes but not in others,
 3) rearrangements that transform one genome to other genomes.

Other Packages Related to sibelia

• dep: lagan

  highly parametrizable pairwise global genome sequence aligner

• dep: libc6 (>= 2.34) [not alpha, loong64, sh4]

  GNU C 라이브러리: 공유 라이브러리
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.40) [loong64, sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C 라이브러리: 공유 라이브러리
  also a virtual package provided by libc6.1-udeb

• dep: libdivsufsort3 (>= 2.0.1)

  fast suffix array construction

• dep: libgcc-s1 (>= 3.0) [not alpha, armel, armhf, hppa, m68k, riscv64, sh4, sparc64]

  GCC 기능 지원 라이브러리

  dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sh4, sparc64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC 기능 지원 라이브러리

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC 기능 지원 라이브러리

• dep: libstdc++6 (>= 13.1) [m68k]

  GNU 표준 C++ 라이브러리 v3

  dep: libstdc++6 (>= 14) [not m68k]

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• sug: sibelia-examples

  comparative genomics tool (example data)

Download sibelia

Download for all available architectures

Architecture	Package Size	Installed Size	Files
alpha (unofficial port)	306.7 kB	1,295.0 kB	[list of files]
amd64	329.2 kB	1,232.0 kB	[list of files]
arm64	292.5 kB	1,228.0 kB	[list of files]
armel	293.8 kB	1,171.0 kB	[list of files]
armhf	299.1 kB	967.0 kB	[list of files]
hppa (unofficial port)	296.3 kB	1,059.0 kB	[list of files]
i386	342.2 kB	1,223.0 kB	[list of files]
loong64 (unofficial port)	296.9 kB	1,164.0 kB	[list of files]
m68k (unofficial port)	317.8 kB	1,347.0 kB	[list of files]
mips64el	288.0 kB	1,255.0 kB	[list of files]
ppc64 (unofficial port)	311.4 kB	1,292.0 kB	[list of files]
ppc64el	315.0 kB	1,228.0 kB	[list of files]
riscv64	308.1 kB	1,056.0 kB	[list of files]
s390x	316.6 kB	1,148.0 kB	[list of files]
sh4 (unofficial port)	358.6 kB	1,164.0 kB	[list of files]
sparc64 (unofficial port)	280.3 kB	2,128.0 kB	[list of files]
x32 (unofficial port)	331.3 kB	1,175.0 kB	[list of files]