Paketti: plink2 (2.00~a3-210203+dfsg-1 ja muut)

[ Source: plink2  ]

whole-genome association analysis toolset

plink expects as input the data from SNP (single nucleotide polymorphism) chips of many individuals and their phenotypical description of a disease. It finds associations of single or pairs of DNA variations with a phenotype and can retrieve SNP annotation from an online source.

SNPs can evaluated individually or as pairs for their association with the disease phenotypes. The joint investigation of copy number variations is supported. A variety of statistical tests have been implemented.

plink2 is a comprehensive update of plink and plink1.9 with new algorithms and new methods, faster and less memory consumer than the first plink.

Muut pakettiin plink2 liittyvät paketit

• dep: libatomic1 (>= 4.8) [armel, mipsel]

  support library providing __atomic built-in functions

• dep: libblas3

  Basic Linear Algebra Reference implementations, shared library

  tai libblas.so.3

  näennäispaketti, jonka toteuttaa libatlas3-base, libblas3, libblis3-openmp, libblis3-pthread, libblis3-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libc6 (>= 2.29)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: libdeflate0 (>= 1.0)

  fast, whole-buffer DEFLATE-based compression and decompression

• dep: libgcc-s1 (>= 3.5) [armel, armhf]

  GCC:n apukirjasto

  dep: libgcc-s1 (>= 4.2) [i386, mipsel]

• dep: liblapack3

  Library of linear algebra routines 3 - shared version

  tai liblapack.so.3

  näennäispaketti, jonka toteuttaa libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libstdc++6 (>= 4.1.1) [armel, armhf]

  GNU standardi C++ -kirjasto, versio 3

• dep: libzstd1 (>= 1.4.0)

  fast lossless compression algorithm

• dep: zlib1g (>= 1:1.1.4)

  pakkauskirjaston ajonaikaistiedostot

Imuroi plink2

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
amd64	2.00~a3-210203+dfsg-1+b1	1,796.9 kt	14,206.0 kt	[tiedostoluettelo]
arm64	2.00~a3-210203+dfsg-1+b1	828.6 kt	2,183.0 kt	[tiedostoluettelo]
armel	2.00~a3-210203+dfsg-1+b1	793.7 kt	2,249.0 kt	[tiedostoluettelo]
armhf	2.00~a3-210203+dfsg-1+b1	805.3 kt	1,645.0 kt	[tiedostoluettelo]
i386	2.00~a3-210203+dfsg-1+b1	1,210.7 kt	10,374.0 kt	[tiedostoluettelo]
mips64el	2.00~a3-210203+dfsg-1+b1	977.4 kt	2,955.0 kt	[tiedostoluettelo]
mipsel	2.00~a3-210203+dfsg-1+b1	900.0 kt	2,683.0 kt	[tiedostoluettelo]
ppc64el	2.00~a3-210203+dfsg-1+b1	960.9 kt	2,831.0 kt	[tiedostoluettelo]
s390x	2.00~a3-210203+dfsg-1+b1	899.6 kt	2,687.0 kt	[tiedostoluettelo]