[ 原始碼： bio-tradis ]
套件：bio-tradis（1.4.5+dfsg2-1）
bio-tradis 的相關連結
Debian 的資源：
下載原始碼套件 bio-tradis：
- [bio-tradis_1.4.5+dfsg2-1.dsc]
- [bio-tradis_1.4.5+dfsg2.orig.tar.xz]
- [bio-tradis_1.4.5+dfsg2-1.debian.tar.xz]
維護小組：
外部的資源：
- 主頁 [github.com]
相似套件：
analyse the output from TraDIS analyses of genomic sequences
Bio-Tradis contains a set of tools to analyse the output from TraDIS analyses.
The Bio-Tradis analysis pipeline is implemented as an extensible Perl library which can either be used as is, or as a basis for the development of more advanced analysis tools.
Please note: You need to manually install BioConductor Edger which can not be distributed by Debian in recent version since it is using non-distributable code locfit.
其他與 bio-tradis 有關的套件
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- dep: libbio-perl-perl
- BioPerl core perl modules
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- dep: libexception-class-perl
- module that allows you to declare real exception classes in Perl
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- dep: libmoose-perl
- modern Perl object system framework
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- dep: libtext-csv-perl
- comma-separated values manipulator (using XS or PurePerl)
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- dep: libtry-tiny-perl
- module providing minimalistic try/catch
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
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- dep: r-base-core
- GNU R core of statistical computation and graphics system
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- dep: r-cran-getopt
- GNU R package providing command-line parsing functionality
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- dep: r-cran-mass
- GNU R package of Venables and Ripley's MASS
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- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- dep: smalt
- Sequence Mapping and Alignment Tool
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- dep: tabix
- generic indexer for TAB-delimited genome position files
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- sug: artemis
- genome browser and annotation tool
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- sug: r-bioc-edger
- Empirical analysis of digital gene expression data in R