软件包：libhts-dev（1.19+ds-1.1 以及其他的） [debports]
development files for the HTSlib
HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.
HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.
This package contains development files for the HTSlib: headers, static library, manual pages, etc.
For compatibility with sambamba, the internal routine cram_to_bam was exported, hereto adopting a patch found in guix.
其他与 libhts-dev 有关的软件包
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- dep: libcurl4-gnutls-dev
- development files and documentation for libcurl (GnuTLS flavour)
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- dep: libdeflate-dev
- headers for whole-buffer compression and decompression library
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- dep: libhts3t64 (= 1.19+ds-1.1+b1)
- C library for high-throughput sequencing data formats
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- dep: liblzma-dev
- XZ-format compression library - development files
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- dep: zlib1g-dev
- 压缩库 - 开发文件