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[ 源代码: damapper  ]

软件包:damapper(0.0+git20210330.ab45103-2)

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long read to reference genome mapping tool

Recognised as the Damapper Library, this is a long read to reference genome mapping command line tool.

For a given reference database 'X' and read block 'Y', damapper produces the single file 'Y.X.las'. Each output file is sorted in order of the A-reads, and if a match is a chain of local alignments, then the LA's in the chain occur in increasing order of A-coordinates.

HPC.damapper writes a UNIX shell script to the standard output that maps every read in blocks <first> to <last> of database <reads> to a reference sequence <ref>. If <last> is missing then only the single block <first> is mapped, and if <first> is also missing then all blocks of the database are mapped.

This package contains the damapper and HPC.damapper binaries.

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硬件架构 软件包大小 安装后大小 文件
alpha (非官方移植版) 101.9 kB428.0 kB [文件列表]
amd64 106.8 kB308.0 kB [文件列表]
arm64 95.0 kB364.0 kB [文件列表]
armel 96.4 kB298.0 kB [文件列表]
armhf 95.3 kB222.0 kB [文件列表]
hppa (非官方移植版) 103.0 kB308.0 kB [文件列表]
i386 107.0 kB342.0 kB [文件列表]
ia64 (非官方移植版) 128.4 kB549.0 kB [文件列表]
m68k (非官方移植版) 94.2 kB298.0 kB [文件列表]
mips64el 96.5 kB373.0 kB [文件列表]
ppc64 (非官方移植版) 108.7 kB428.0 kB [文件列表]
ppc64el 109.9 kB428.0 kB [文件列表]
riscv64 105.2 kB244.0 kB [文件列表]
s390x 113.0 kB328.0 kB [文件列表]
sh4 (非官方移植版) 118.5 kB298.0 kB [文件列表]
sparc64 (非官方移植版) 94.3 kB2,095.0 kB [文件列表]
x32 (非官方移植版) 104.0 kB290.0 kB [文件列表]