软件包：r-bioc-rtracklayer（1.58.0-1）

[ 源代码： r-bioc-rtracklayer  ]

GNU R interface to genome browsers and their annotation tracks

Extensible framework for interacting with multiple genome browsers (currently UCSC built-in) and manipulating annotation tracks in various formats (currently GFF, BED, bedGraph, BED15, WIG, BigWig and 2bit built-in). The user may export/import tracks to/from the supported browsers, as well as query and modify the browser state, such as the current viewport.

其他与 r-bioc-rtracklayer 有关的软件包

• dep: libc6 (>= 2.34)

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• dep: r-api-4.0

  本虚包由这些包填实： r-base-core

• dep: r-api-bioc-3.16

  本虚包由这些包填实： r-bioc-biocgenerics

• dep: r-base-core (>= 4.2.2.20221110-1)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-biocgenerics (>= 0.35.3)

  generic functions for Bioconductor

• dep: r-bioc-biocio

  standard input and output for Bioconductor packages

• dep: r-bioc-biostrings (>= 2.47.6)

  GNU R string objects representing biological sequences

• dep: r-bioc-genomeinfodb (>= 1.15.2)

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicalignments (>= 1.15.6)

  BioConductor representation and manipulation of short genomic alignments

• dep: r-bioc-genomicranges (>= 1.37.2)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-iranges (>= 2.13.13)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-rsamtools (>= 1.31.2)

  GNU R binary alignment (BAM), variant call (BCF), or tabix file import

• dep: r-bioc-s4vectors (>= 0.23.18)

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-xvector (>= 0.19.7)

  BioConductor representation and manpulation of external sequences

• dep: r-bioc-zlibbioc

  (Virtual) zlibbioc Bioconductor package

• dep: r-cran-rcurl (>= 1.4-2)

  GNU R General network (HTTP/FTP/...) client interface

• dep: r-cran-restfulr (>= 0.0.13)

  GNU R interface to RESTful web wervices

• dep: r-cran-xml (>= 1.98-0)

  GNU R package for XML parsing and generation

• dep: zlib1g (>= 1:1.1.4)

  压缩库 - 运行时

• sug: r-bioc-bsgenome (>= 1.33.4)

  BioConductor infrastructure for Biostrings-based genome data packages

• sug: r-bioc-genefilter

  methods for filtering genes from microarray experiments

• sug: r-bioc-genomicfeatures

  GNU R tools for making and manipulating transcript centric annotations

• sug: r-bioc-limma

  linear models for microarray data

• sug: r-bioc-org.hs.eg.db

  genome-wide annotation for Human

• sug: r-cran-runit

  GNU R package providing unit testing framework

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硬件架构	软件包大小	安装后大小	文件
amd64	4,984.3 kB	6,693.0 kB	[文件列表]
arm64	4,973.1 kB	6,729.0 kB	[文件列表]
armel	4,954.4 kB	6,596.0 kB	[文件列表]
armhf	4,955.6 kB	6,532.0 kB	[文件列表]
i386	5,004.7 kB	6,748.0 kB	[文件列表]
mips64el	4,959.4 kB	6,776.0 kB	[文件列表]
mipsel	4,963.7 kB	6,771.0 kB	[文件列表]
ppc64el	5,006.5 kB	6,921.0 kB	[文件列表]
s390x	4,975.1 kB	6,733.0 kB	[文件列表]