Paket: megadepth (1.2.0-4)

[ Kaynak: megadepth  ]

computes coverage from BigWig and BAM sequencing files

A major concern for the interpretation of DNA and RNA (!) sequencing is the number of reads that cover a particular area. This package has interesting statistics for the distinction of coding and non-coding parts of the genome and knows how to interpret transcripts that span multiple exons.

This package is a successor of the program 'bamcount'.

megadepth ile İlgili Diğer Paketler

• dep: libbigwig0 (>= 0.4.6+dfsg)

  C library for handling bigWig files

• dep: libc6 (>= 2.14) [amd64]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.4) [amd64, arm64, ppc64el değil]

• dep: libgcc-s1 (>= 3.0) [armel, armhf, i386 değil]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [i386]

• dep: libhts3 (>= 1.10)

  C library for high-throughput sequencing data formats

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• sug: r-bioc-megadepth

  BioCOnductor BigWig and BAM related utilities

megadepth indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	78,3 kB	266,0 kB	[dosya listesi]
arm64	68,9 kB	274,0 kB	[dosya listesi]
armel	68,7 kB	273,0 kB	[dosya listesi]
armhf	69,1 kB	209,0 kB	[dosya listesi]
i386	81,1 kB	273,0 kB	[dosya listesi]
mips64el	68,8 kB	281,0 kB	[dosya listesi]
ppc64el	81,5 kB	338,0 kB	[dosya listesi]
s390x	70,2 kB	262,0 kB	[dosya listesi]