Paket: khmer (2.1.2+dfsg-8)

[ Kaynak: khmer  ]

in-memory DNA sequence kmer counting, filtering & graph traversal

khmer is a library and suite of command line tools for working with DNA sequence. It is primarily aimed at short-read sequencing data such as that produced by the Illumina platform. khmer takes a k-mer-centric approach to sequence analysis, hence the name.

Etiketler: Biyoloji: Fasta/Pearson, Nükleik Asitler, Alan: field::biology, field::biology:bioinformatics, Geliştirildiği dil: implemented-in::c++, implemented-in::python, Kullanıcı Arayüzü: Komut Satırı, Rol: role::program, use::analysing, Amaç: Karşılaştırma, Filtreleme

khmer ile İlgili Diğer Paketler

• dep: cython3 (>= 0.26.1)

  C-Extensions for Python 3

• dep: khmer-common

  common files for the khmer project tools

• dep: libbz2-1.0

  high-quality block-sorting file compressor library - runtime

• dep: libc6 (>= 2.29)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: libgcc-s1 (>= 3.0) [arm64]

  GCC support library

  dep: libgcc-s1 (>= 3.4) [amd64]

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.10)

  dep: python3 (>= 3.9~)

• dep: python3-bz2file

  Python3 library for reading and writing bzip2-compressed files

• dep: python3-screed (>= 1.0)

  short nucleotide read sequence utils in Python 3

• dep: zlib1g (>= 1:1.2.3.4)

  compression library - runtime

khmer indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	6.586,5 kB	29.785,0 kB	[dosya listesi]
arm64	6.491,9 kB	29.482,0 kB	[dosya listesi]