Pacote: libgkarrays-dev (2.1.0+dfsg-2)

[ Fonte: libgkarrays  ]

library to query large collection of NGS sequences (development)

Gk-arrays are provided as a simple-to-use C++ library dedicated to queries on large collection of sequences as produced by high-throughput sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche).

Gk-arrays index k-mers of reads and allows one to answer different queries on that read collection (e.g. how many reads share this k-mer? where does this k-mer occur in the read collection?).

Gk-arrays consist of a space-efficient alternative to hash tables while being similar in terms of query times.

This is the development library for libgkarrays.

Etiquetas: Desenvolvimento de software: Bibliotecas, Função: Biblioteca de desenvolvimento

Outros pacotes relacionados a libgkarrays-dev

• dep: libgkarrays1 (= 2.1.0+dfsg-2)

  library to query large collection of NGS sequences

Download de libgkarrays-dev

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