Package: ssw-align (1.2.5-1) [debports]

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Experimental package

Warning: This package is from the experimental distribution. That means it is likely unstable or buggy, and it may even cause data loss. Please be sure to consult the changelog and other possible documentation before using it.

Smith-Waterman aligner based on libssw

This package provides a command-line aligner based on the libssw library, a fast SIMD accelerated implementation of the Smith-Waterman algorithm. The input files can be in FASTA or FASTQ format. Both target and query files can contain multiple sequences. Each sequence in the query file will be aligned with all sequences in the target file. Output is provided in SAM or BLAST-like text format.

Other Packages Related to ssw-align

• dep: libc6 (>= 2.34)

  Libreria C GNU: librerie condivise
  also a virtual package provided by libc6-udeb

• dep: libssw1 (= 1.2.5-1)

  fast SIMD parallelized implementation of the Smith-Waterman algorithm

• dep: zlib1g (>= 1:1.1.4)

  libreria di compressione - runtime

Download ssw-align

Download for all available architectures

Architecture	Package Size	Installed Size	Files
ppc64 (unofficial port)	23.3 kB	84.0 kB	[list of files]