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jessie  ] [  bullseye  ] [  sid  ]
[ Source: qiime  ]

Package: qiime (2020.11.1-1 and others)

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Quantitative Insights Into Microbial Ecology

QIIME 2 is a powerful, extensible, and decentralized microbiome analysis package with a focus on data and analysis transparency. QIIME 2 enables researchers to start an analysis with raw DNA sequence data and finish with publication-quality figures and statistical results. Key features:

 * Integrated and automatic tracking of data provenance
 * Semantic type system
 * Plugin system for extending microbiome analysis functionality
 * Support for multiple types of user interfaces (e.g. API, command line,

QIIME 2 is a complete redesign and rewrite of the QIIME 1 microbiome analysis pipeline. QIIME 2 will address many of the limitations of QIIME 1, while retaining the features that makes QIIME 1 a powerful and widely-used analysis pipeline.

QIIME 2 currently supports an initial end-to-end microbiome analysis pipeline. New functionality will regularly become available through QIIME 2 plugins. You can view a list of plugins that are currently available on the QIIME 2 plugin availability page. The future plugins page lists plugins that are being developed.

Tags: Role: Program

Other Packages Related to qiime

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Download qiime

Download for all available architectures
Architecture Version Package Size Installed Size Files
all 2020.11.1-1 147.0 kB1,057.0 kB [list of files]
alpha (unofficial port) 1.9.1+dfsg-1+b1 1,652.2 kB12,240.0 kB [list of files]
hppa (unofficial port) 1.9.1+dfsg-1+b1 1,809.2 kB13,153.0 kB [list of files]
m68k (unofficial port) 1.9.1+dfsg-1 1,282.9 kB9,258.0 kB [list of files]
ppc64 (unofficial port) 1.9.1+dfsg-1+b2 1,276.3 kB10,815.0 kB [list of files]
sparc64 (unofficial port) 1.9.1+dfsg-1+b2 1,213.0 kB8,889.0 kB [list of files]
x32 (unofficial port) 1.9.1+dfsg-1+b1 1,968.8 kB9,363.0 kB [list of files]