Package: snpomatic (1.0-6)

[ Source: snpomatic  ]

fast, stringent short-read mapping software

High throughput sequencing technologies generate large amounts of short reads. Mapping these to a reference sequence consumes large amounts of processing time and memory, and read mapping errors can lead to noisy or incorrect alignments.

SNP-o-matic is a fast, stringent short-read mapping software. It supports a multitude of output types and formats, for uses in filtering reads, alignments, sequence-based genotyping calls, assisted reassembly of contigs etc.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with::biological-sequence

Other Packages Related to snpomatic

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0) [not armel, armhf]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

Download snpomatic

Download for all available architectures

Architecture	Package Size	Installed Size	Files
amd64	83.1 kB	216.0 kB	[list of files]
arm64	74.2 kB	216.0 kB	[list of files]
armel	67.5 kB	175.0 kB	[list of files]
armhf	69.4 kB	135.0 kB	[list of files]
i386	85.7 kB	219.0 kB	[list of files]
mips64el	77.2 kB	286.0 kB	[list of files]
mipsel	77.6 kB	284.0 kB	[list of files]
ppc64el	86.0 kB	280.0 kB	[list of files]
s390x	73.6 kB	212.0 kB	[list of files]