Пакет: samblaster (0.1.26-1)

[ Източник: samblaster  ]

marks duplicates, extracts discordant/split reads

Current "next-generation" sequencing technologies cannot tell what exact sequence they will be reading. They take what is available. And if some sequences are read very often, then this needs some extra biomedical thinking. The genome could for instance be duplicated.

samblaster is a fast and flexible program for marking duplicates in read-id grouped paired-end SAM files. It can also optionally output discordant read pairs and/or split read mappings to separate SAM files, and/or unmapped/clipped reads to a separate FASTQ file. When marking duplicates, samblaster will require approximately 20MB of memory per 1M read pairs.

Други пакети, свързани с samblaster

• dep: libc6 (>= 2.2)

  GNU C Library: Shared libraries
  също и виртуален пакет, предлаган от libc6-udeb

• dep: libgcc-s1 (>= 4.2)

  GCC support library

• dep: libstdc++6 (>= 5)

  GNU Standard C++ Library v3

Изтегляне на samblaster

Изтегляне за всички налични архитектури

Архитектура	Големина на пакета	Големина след инсталиране	Файлове
mipsel	26,6 кБ	72,0 кБ	[списък на файловете]