Paket: trf (4.09.1-6 ve diğerleri)

[ Kaynak: trf  ]

locate and display tandem repeats in DNA sequences

A tandem repeat in DNA is two or more adjacent, approximate copies of a pattern of nucleotides. Tandem Repeats Finder is a program to locate and display tandem repeats in DNA sequences. In order to use the program, the user submits a sequence in FASTA format. There is no need to specify the pattern, the size of the pattern or any other parameter. The output consists of two files: a repeat table file and an alignment file. The repeat table, viewable in a web browser, contains information about each repeat, including its location, size, number of copies and nucleotide content. Clicking on the location indices for one of the table entries opens a second browser page that shows an alignment of the copies against a consensus pattern. The program is very fast, analyzing sequences on the order of .5Mb in just a few seconds. Submitted sequences may be of arbitrary length. Repeats with pattern size in the range from 1 to 2000 bases are detected.

trf ile İlgili Diğer Paketler

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

trf indir

Tüm mevcut mimariler için indir

Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	4.09.1-6	56,9 kB	167,0 kB	[dosya listesi]
arm64	4.09.1-6	52,9 kB	183,0 kB	[dosya listesi]
armel	4.09.1-6	55,4 kB	182,0 kB	[dosya listesi]
armhf	4.09.1-6	53,0 kB	182,0 kB	[dosya listesi]
i386	4.09.1-6	55,7 kB	166,0 kB	[dosya listesi]
mips64el	4.09.1-6	55,3 kB	187,0 kB	[dosya listesi]
ppc64el	4.09.1-6	58,0 kB	183,0 kB	[dosya listesi]
riscv64	4.09.1-6+b1	55,4 kB	148,0 kB	[dosya listesi]
s390x	4.09.1-6	53,8 kB	163,0 kB	[dosya listesi]