Pakket: edlib-aligner (1.2.7-4 en anderen)

[ Bron: libedlib  ]

edlib sequence alignment tool using edit distance

Edlib is a lightweight and super fast C/C++ library for sequence alignment using edit distance. This package provides an aligner using this library.

Features of libedlib

 * Calculates edit distance (Levehnstein distance).
 * It can find optimal alignment path (instructions how to transform
   first sequence into the second sequence).
 * It can find just the start and/or end locations of alignment path -
   can be useful when speed is more important than having exact
   alignment path.
 * Supports multiple alignment methods: global(NW), prefix(SHW) and
   infix(HW), each of them useful for different scenarios.
 * You can extend character equality definition, enabling you to e.g.
   have wildcard characters, to have case insensitive alignment or to
   work with degenerate nucleotides.
 * It can easily handle small or very large sequences, even when finding
   alignment path, while consuming very little memory.
 * Super fast thanks to Myers's bit-vector algorithm.

Andere aan edlib-aligner gerelateerde pakketten

• dep: libc6 (>= 2.34)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libedlib1 (= 1.2.7-4+b1)

  library for sequence alignment using edit distance

• dep: libgcc-s1 (>= 3.0) [niet armel, armhf]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

edlib-aligner downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	1.2.7-4+b1	24,2 kB	67,0 kB	[overzicht]
arm64	1.2.7-4+b1	22,4 kB	87,0 kB	[overzicht]
armel	1.2.7-4+b1	19,6 kB	54,0 kB	[overzicht]
armhf	1.2.7-4+b1	19,7 kB	46,0 kB	[overzicht]
i386	1.2.7-4+b1	23,2 kB	62,0 kB	[overzicht]
mips64el	1.2.7-4+b1	23,1 kB	88,0 kB	[overzicht]
mipsel	1.2.7-4+b1	22,3 kB	87,0 kB	[overzicht]
ppc64el	1.2.7-4+b1	27,4 kB	87,0 kB	[overzicht]
s390x	1.2.7-4+b1	22,7 kB	67,0 kB	[overzicht]