Package: libbio-db-hts-perl (3.01-4 and others)

[ Source: libbio-db-hts-perl  ]

Perl interface to the HTS library

HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.

HTSlib implements a generalized BAM (binary SAM) index, with file extension 'csi' (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.

This package provides a Perl interface to the HTS library.

Other Packages Related to libbio-db-hts-perl

• dep: libbio-perl-perl

  BioPerl core perl modules

• dep: libc6 (>= 2.14) [amd64]

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.22) [ppc64el]

  dep: libc6 (>= 2.4) [not amd64, arm64, ppc64el]

• dep: libhts3 (>= 1.10)

  C library for high-throughput sequencing data formats

• dep: perl (>= 5.36.0-4)

  Larry Wall's Practical Extraction and Report Language

• dep: perlapi-5.36.0

  virtual package provided by perl-base

• dep: zlib1g (>= 1:1.2.3.3)

  tömörítő könyvtár - futásidejű

Download libbio-db-hts-perl

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
amd64	3.01-4+b1	153.2 kB	444.0 kB	[list of files]
arm64	3.01-4+b1	147.7 kB	487.0 kB	[list of files]
armel	3.01-4+b1	149.8 kB	487.0 kB	[list of files]
armhf	3.01-4+b1	149.0 kB	487.0 kB	[list of files]
i386	3.01-4+b1	154.5 kB	459.0 kB	[list of files]
mips64el	3.01-4+b1	143.2 kB	560.0 kB	[list of files]
mipsel	3.01-4+b1	143.4 kB	558.0 kB	[list of files]
ppc64el	3.01-4+b1	150.9 kB	552.0 kB	[list of files]
s390x	3.01-4+b1	150.3 kB	457.0 kB	[list of files]