Package: tree-puzzle (5.3~rc16+dfsg-9 and others)

[ Source: tree-puzzle  ]

Rekonstruktion af fylogenetiske træer gennem maksimal lighed

TREE-PUZZLE (det nye navn for PUZZLE) er et interaktivt konsolprogram, der implementerer en hurtig algoritme for træ-søgning, kvartets-gåder (»quartet-puzzling«), der tillader analyse af større datasæt og automatisk tildeling af estimater af understøttelse for hver enkelt interne gren. TREE-PUZZLE beregner også parvist sandsynligheden for maksimale distancer, og desuden længden på grene for træer angivet af bruger. Længde på grene kan også beregnes med antagelsen af et ur (»clock-assumption«). Yderligere tilbyder TREE-PUZZLE en ny metode, ligheds-kortlægning, til at undersøge understøttelsen af hypotese-baserede interne grene uden beregning af træet i sin helhed, samt visualisering af det fylogenetistiske indhold af sekvensjusteringer.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::analysing, use::comparing, Supports Format: Plain Text, Works with: Need an extra tag

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Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	5.3~rc16+dfsg-9+b1	166.5 kB	493.0 kB	[list of files]
amd64	5.3~rc16+dfsg-9+b1	165.3 kB	397.0 kB	[list of files]
arm64	5.3~rc16+dfsg-9+b1	150.5 kB	428.0 kB	[list of files]
armel	5.3~rc16+dfsg-9+b1	160.0 kB	412.0 kB	[list of files]
armhf	5.3~rc16+dfsg-9+b1	150.9 kB	304.0 kB	[list of files]
hppa (unofficial port)	5.3~rc16+dfsg-9+b1	158.1 kB	401.0 kB	[list of files]
i386	5.3~rc16+dfsg-9+b1	177.7 kB	484.0 kB	[list of files]
ia64 (unofficial port)	5.3~rc16+dfsg-9+b1	214.9 kB	785.0 kB	[list of files]
m68k (unofficial port)	5.3~rc16+dfsg-9+b1	152.7 kB	420.0 kB	[list of files]
mips64el	5.3~rc16+dfsg-9+b1	164.8 kB	508.0 kB	[list of files]
ppc64 (unofficial port)	5.3~rc16+dfsg-9+b1	176.8 kB	493.0 kB	[list of files]
ppc64el	5.3~rc16+dfsg-9+b1	175.0 kB	493.0 kB	[list of files]
riscv64	5.3~rc16+dfsg-9+b2	166.1 kB	345.0 kB	[list of files]
s390x	5.3~rc16+dfsg-9+b1	175.4 kB	440.0 kB	[list of files]
sh4 (unofficial port)	5.3~rc16+dfsg-9+b1	178.0 kB	365.0 kB	[list of files]
sparc64 (unofficial port)	5.3~rc16+dfsg-9+b1	152.5 kB	1,070.0 kB	[list of files]
x32 (unofficial port)	5.3~rc16+dfsg-9+b1	161.8 kB	376.0 kB	[list of files]