[ 原始碼: murasaki ]
套件:murasaki-mpi(1.68.6-13 以及其他的)
murasaki-mpi 的相關連結
Debian 的資源:
下載原始碼套件 murasaki:
- [murasaki_1.68.6-13.dsc]
- [murasaki_1.68.6.orig-debian-tests-data.tar.gz]
- [murasaki_1.68.6.orig.tar.gz]
- [murasaki_1.68.6-13.debian.tar.xz]
維護小組:
外部的資源:
- 主頁 [murasaki.dna.bio.keio.ac.jp]
相似套件:
homology detection tool across multiple large genomes (MPI-version)
Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.
Murasaki is an anchor alignment software, which is
* exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 52 wall minutes)) * scalable (Arbitrarily parallelizable across multiple nodes using MPI. Even a single node with 16GB of ram can handle over 1Gbp of sequence.) * unlimited pattern length * repeat tolerant * intelligent noise reduction
This package provides the MPI-enabled binary for murasaki. While this will speed up operation on multi-processor machines it will slow down on a single processor.
其他與 murasaki-mpi 有關的套件
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- dep: libboost-filesystem1.83.0 (>= 1.83.0)
- filesystem operations (portable paths, iteration over directories, etc) in C++
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- dep: libboost-iostreams1.83.0 (>= 1.83.0)
- Boost.Iostreams Library
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- dep: libc6 (>= 2.34)
- GNU C 函式庫:共用函式庫
同時作為一個虛擬套件由這些套件填實: libc6-udeb
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- dep: libgcc-s1 (>= 3.0) [除 armel, armhf]
- GCC 支援函式庫
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
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- dep: libopenmpi3t64 (>= 4.1.6)
- high performance message passing library -- shared library
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- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
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- dep: murasaki-common
- homology detection tool across multiple large genomes (common files)
下載 murasaki-mpi
硬體架構 | 版本 | 套件大小 | 安裝後大小 | 檔案 |
---|---|---|---|---|
amd64 | 1.68.6-13+b5 | 725。1 kB | 5,095。0 kB | [檔案列表] |
arm64 | 1.68.6-13+b5 | 630。7 kB | 5,159。0 kB | [檔案列表] |
armel | 1.68.6-13+b5 | 481。5 kB | 3,423。0 kB | [檔案列表] |
armhf | 1.68.6-13+b5 | 495。5 kB | 2,415。0 kB | [檔案列表] |
i386 | 1.68.6-13+b5 | 737。6 kB | 4,803。0 kB | [檔案列表] |
mips64el | 1.68.6-13+b5 | 688。8 kB | 6,877。0 kB | [檔案列表] |
ppc64el | 1.68.6-13+b4 | 719。3 kB | 6,503。0 kB | [檔案列表] |
s390x | 1.68.6-13+b4 | 707。7 kB | 5,742。0 kB | [檔案列表] |