套件：density-fitness（1.0.8-4 以及其他的） [debports]
Calculates per-residue electron density scores
The program density-fitness calculates electron density metrics, for main- (includes Cβ atom) and side-chain atoms of individual residues.
For this calculation, the program uses the structure model in either PDB or mmCIF format and the electron density from the 2mFo-DFc and mFo-DFc maps. If these maps are not readily available, the MTZ file and model can be used to calculate maps clipper. Density-fitness support both X-ray and electron diffraction data.
This program is essentially a reimplementation of edstats, a program available from the CCP4 suite. However, the output now contains only the RSR, SRSR and RSCC fields as in edstats with the addition of EDIAm and OPIA and no longer requires pre-calculated map coefficients.
其他與 density-fitness 有關的套件
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- dep: libboost-date-time1.83.0 (>= 1.83.0)
- set of date-time libraries based on generic programming concepts
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- dep: libboost-regex1.83.0-icu72
- 本虛擬套件由這些套件填實： libboost-regex1.83.0
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- dep: libc6 (>= 2.34)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
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- dep: libccp4c0 (>= 8.0.0)
- CCP4 core functionality - C runtime
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- dep: libcifpp5 (>= 5.0.7.1)
- Library files for libcifpp
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- dep: libclipper2 (>= 2.1.20201109)
- object oriented library for crystallographic computing
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- dep: libgcc-s1 (>= 3.0)
- GCC 支援函式庫
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- dep: libgsl27 (>= 2.7.1)
- GNU Scientific Library (GSL) -- library package
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- dep: libgslcblas0 (>= 2.7.1)
- GNU Scientific Library (GSL) -- blas library package
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- dep: libnewuoa0 (>= 0.1.2)
- Library file for libnewuoa
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- dep: libpdb-redo3 (>= 3.0.5)
- Library file for libpdb-redo
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- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
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- dep: libzeep5.1 (>= 5.1.8)
- Library file for libzeep
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- dep: zlib1g (>= 1:1.2.2)
- 壓縮函式庫 - 跑程式時用(runtime)