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[ 原始碼： progressivemauve  ]

套件：progressivemauve（1.2.0+4713+dfsg-5 以及其他的）

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multiple genome alignment algorithms

The mauveAligner and progressiveMauve alignment algorithms have been implemented as command-line programs included with the downloadable Mauve software. When run from the command-line, these programs provide options not yet available in the graphical interface.

Mauve is a system for efficiently constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion. Multiple genome alignment provides a basis for research into comparative genomics and the study of evolutionary dynamics. Aligning whole genomes is a fundamentally different problem than aligning short sequences.

Mauve has been developed with the idea that a multiple genome aligner should require only modest computational resources. It employs algorithmic techniques that scale well in the amount of sequence being aligned. For example, a pair of Y. pestis genomes can be aligned in under a minute, while a group of 9 divergent Enterobacterial genomes can be aligned in a few hours.

Mauve computes and interactively visualizes genome sequence comparisons. Using FastA or GenBank sequence data, Mauve constructs multiple genome alignments that identify large-scale rearrangement, gene gain, gene loss, indels, and nucleotide substutition.

Mauve is developed at the University of Wisconsin.

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下載 progressivemauve

下載可用於所有硬體架構的
硬體架構 版本 套件大小 安裝後大小 檔案
alpha （非官方移植版） 1.2.0+4713+dfsg-5+b2 892。3 kB6，441。0 kB [檔案列表]
amd64 1.2.0+4713+dfsg-5+b3 850。6 kB5，393。0 kB [檔案列表]
arm64 1.2.0+4713+dfsg-5+b3 791。1 kB5，774。0 kB [檔案列表]
armel 1.2.0+4713+dfsg-5+b3 671。7 kB3，966。0 kB [檔案列表]
armhf 1.2.0+4713+dfsg-5+b3 668。8 kB3，070。0 kB [檔案列表]
hppa （非官方移植版） 1.2.0+4713+dfsg-5+b3 939。2 kB5，325。0 kB [檔案列表]
i386 1.2.0+4713+dfsg-5+b3 842。1 kB5，254。0 kB [檔案列表]
ia64 （非官方移植版） 1.2.0+4713+dfsg-5+b2 1，091。3 kB9，489。0 kB [檔案列表]
m68k （非官方移植版） 1.2.0+4713+dfsg-5+b3 811。2 kB5，262。0 kB [檔案列表]
mips64el 1.2.0+4713+dfsg-5+b3 823。7 kB6，838。0 kB [檔案列表]
ppc64 （非官方移植版） 1.2.0+4713+dfsg-5+b2 852。6 kB7，313。0 kB [檔案列表]
ppc64el 1.2.0+4713+dfsg-5+b3 877。5 kB6，863。0 kB [檔案列表]
riscv64 1.2.0+4713+dfsg-5+b3 939。3 kB4，687。0 kB [檔案列表]
s390x 1.2.0+4713+dfsg-5+b3 729。4 kB5，366。0 kB [檔案列表]
sh4 （非官方移植版） 1.2.0+4713+dfsg-5+b3 920。5 kB5，641。0 kB [檔案列表]
sparc64 （非官方移植版） 1.2.0+4713+dfsg-5+b2 813。5 kB27，865。0 kB [檔案列表]
x32 （非官方移植版） 1.2.0+4713+dfsg-5+b2 887。1 kB5，310。0 kB [檔案列表]