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[ 原始碼: seqtools  ]

套件:belvu(4.44.1+dfsg-7.1 以及其他的)

belvu 的相關連結

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Debian 的資源:

下載原始碼套件 seqtools

維護小組:

外部的資源:

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multiple sequence alignment viewer and phylogenetic tool

Belvu is a multiple sequence alignment viewer and phylogenetic tool with an extensive set of user-configurable modes to color residues.

 * View multiple sequence alignments.
 * Residues can be coloured by conservation, with user-configurable
   cutoffs and colours.
 * Residues can be coloured by residue type (user-configurable).
 * Colour schemes can be imported or exported.
 * Swissprot (or PIR) entries can be fetched by double clicking.
 * The position in the alignment can be easily tracked.
 * Manual deletion of rows and columns.
 * Automatic editing of rows and columns based on customisable criteria:
    - removal of all-gap columns;
    - removal of all gaps;
    - removal of redundant sequences;
    - removal of a column by a user-specified percentage of gaps;
    - filtering of sequences by percent identity;
    - removal of sequences by a user-specified percentage of gaps;
    - removal of partial sequences (those starting or ending with
      gaps); and
    - removal of columns by conservation (with user-specified
      upper/lower cutoffs).
 * The alignment can be saved in Stockholm, Selex, MSF or FASTA format.
 * Distance matrices between sequences can be generated using a variety
   of distance metrics.
 * Distance matrices can be imported or exported.
 * Phylogenetic trees can be constructed based on various distance-based
   tree reconstruction algorithms.
 * Trees can be saved in New Hampshire format.
 * Belvu can perform bootstrap phylogenetic reconstruction.

標籤: Interface Toolkit: GTK

其他與 belvu 有關的套件

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  • 增強

下載 belvu

下載可用於所有硬體架構的
硬體架構 版本 套件大小 安裝後大小 檔案
alpha (非官方移植版) 4.44.1+dfsg-7.1 1,028。7 kB1,277。0 kB [檔案列表]
amd64 4.44.1+dfsg-7.1+b1 1,030。2 kB1,231。0 kB [檔案列表]
arm64 4.44.1+dfsg-7.1+b1 1,019。6 kB1,275。0 kB [檔案列表]
armel 4.44.1+dfsg-7.1+b1 1,013。9 kB1,190。0 kB [檔案列表]
armhf 4.44.1+dfsg-7.1+b1 1,014。1 kB1,138。0 kB [檔案列表]
hppa (非官方移植版) 4.44.1+dfsg-7.1 1,026。4 kB1,221。0 kB [檔案列表]
i386 4.44.1+dfsg-7.1+b1 1,038。7 kB1,262。0 kB [檔案列表]
ia64 (非官方移植版) 4.44.1+dfsg-7.1 1,051。1 kB1,457。0 kB [檔案列表]
m68k (非官方移植版) 4.44.1+dfsg-7.1 1,028。3 kB1,241。0 kB [檔案列表]
mips64el 4.44.1+dfsg-7.1+b1 1,032。6 kB1,360。0 kB [檔案列表]
ppc64 (非官方移植版) 4.44.1+dfsg-7.1 1,037。5 kB1,338。0 kB [檔案列表]
ppc64el 4.44.1+dfsg-7.1+b1 1,037。4 kB1,339。0 kB [檔案列表]
riscv64 4.44.1+dfsg-7.1+b1 1,027。4 kB1,191。0 kB [檔案列表]
s390x 4.44.1+dfsg-7.1+b1 1,025。0 kB1,247。0 kB [檔案列表]
sh4 (非官方移植版) 4.44.1+dfsg-7.1 1,042。5 kB1,274。0 kB [檔案列表]
sparc64 (非官方移植版) 4.44.1+dfsg-7.1 1,014。9 kB1,990。0 kB [檔案列表]
x32 (非官方移植版) 4.44.1+dfsg-7.1 1,029。8 kB1,213。0 kB [檔案列表]