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[ 原始碼: miniasm  ]

套件:miniasm(0.3+dfsg-1)

miniasm 的相關連結

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ultrafast de novo assembler for long noisy DNA sequencing reads

Miniasm is an experimental very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream assemblers, miniasm does not have a consensus step. It simply concatenates pieces of read sequences to generate the final unitig sequences. Thus the per-base error rate is similar to the raw input reads.

標籤: 生物學: 核酸, 領域: 生物學, field::biology:bioinformatics, implemented-in::c, 使用者介面: 命令行, 角色: role::program, science::calculation, Purpose: Calculating, use::comparing, works-with::biological-sequence

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下載 miniasm

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
amd64 29。7 kB70。0 kB [檔案列表]
arm64 27。5 kB66。0 kB [檔案列表]
armel 28。0 kB66。0 kB [檔案列表]
armhf 26。7 kB54。0 kB [檔案列表]
i386 32。0 kB74。0 kB [檔案列表]
mips 30。2 kB77。0 kB [檔案列表]
mips64el 30。2 kB78。0 kB [檔案列表]
mipsel 30。1 kB77。0 kB [檔案列表]
ppc64el 32。8 kB83。0 kB [檔案列表]
s390x 28。2 kB74。0 kB [檔案列表]