[ 原始碼： bppsuite ]
套件：bppsuite（2.4.1-1）
Bio++ program suite
The Bio++ Program Suite is a package of programs using the Bio++ libraries and dedicated to Phylogenetics and Molecular Evolution. All programs are independent, but can be combined to perform rather complex analyses. These programs use the interface helper tools of the libraries, and hence share the same syntax. They also have several options in common, which may also be shared by third-party software.
The following programs are included:
- BppML for maximum likelihood analysis, - BppSeqGen for sequences simulation, - BppAncestor for ancestral states reconstruction, - BppDist for distance methods, - BppPars for parsimony analysis, - BppSeqMan for file conversion and sequence manipulation, - BppConsense for building consensus tree and computing bootstrap values, - BppReRoot for tree rerooting. - BppTreeDraw for tree drawing. - BppAlnScore for comparing alignments and computing alignment scores. - BppMixedLikelihoods for computing site per site likelihoods of components of mixture models. - BppPopGen for population genetics analyses.
其他與 bppsuite 有關的套件
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- dep: libbpp-core4 [除 amd64]
- Bio++ Core library
- dep: libbpp-core4 (>= 2.4.1) [amd64]
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- dep: libbpp-phyl12 [除 amd64]
- Bio++ Phylogenetic library
- dep: libbpp-phyl12 (>= 2.4.1) [amd64]
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- dep: libbpp-popgen8 [除 amd64]
- Bio++ Population Genetics library
- dep: libbpp-popgen8 (>= 2.4.1) [amd64]
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- dep: libbpp-seq12 [除 amd64]
- Bio++ Sequence library
- dep: libbpp-seq12 (>= 2.4.1) [amd64]
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- dep: libc6 (>= 2.1.3) [i386]
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
- dep: libc6 (>= 2.14) [amd64]
- dep: libc6 (>= 2.17) [arm64]
- dep: libc6 (>= 2.4) [armhf]
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- dep: libgcc1 (>= 1:3.0) [除 armhf]
- GCC 支援函式庫
- dep: libgcc1 (>= 1:3.5) [armhf]
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- sug: bppsuite-examples
- Examples for Bio++ program suite