[ 原始碼： r-bioc-purecn ]
套件：r-bioc-purecn（1.20.0+dfsg-3）
r-bioc-purecn 的相關連結
Debian 的資源：
下載原始碼套件 r-bioc-purecn：
- [r-bioc-purecn_1.20.0+dfsg-3.dsc]
- [r-bioc-purecn_1.20.0+dfsg.orig.tar.xz]
- [r-bioc-purecn_1.20.0+dfsg-3.debian.tar.xz]
維護小組：
外部的資源：
- 主頁 [bioconductor.org]
相似套件：
copy number calling and SNV classification using targeted short read sequencing
This package estimates tumor purity, copy number, and loss of heterozygosity (LOH), and classifies single nucleotide variants (SNVs) by somatic status and clonality. PureCN is designed for targeted short read sequencing data, integrates well with standard somatic variant detection and copy number pipelines, and has support for tumor samples without matching normal samples.
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- dep: r-api-4.0
- 本虛擬套件由這些套件填實： r-base-core
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- dep: r-api-bioc-3.12
- 本虛擬套件由這些套件填實： r-bioc-biocgenerics
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- dep: r-base-core (>= 4.0.3-1)
- GNU R core of statistical computation and graphics system
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- dep: r-bioc-biocgenerics
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- dep: r-bioc-genomicfeatures
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- dep: r-bioc-genomicranges (>= 1.20.3)
- BioConductor representation and manipulation of genomic intervals
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- dep: r-bioc-iranges (>= 2.2.1)
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-rhdf5
- BioConductor HDF5 interface to R
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- dep: r-bioc-rsamtools
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- dep: r-bioc-rtracklayer
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- BioConductor S4 implementation of vectors and lists
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- dep: r-bioc-variantannotation (>= 1.14.1)
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- dep: r-cran-vgam
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- rec: r-cran-testthat
- GNU R testsuite
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- sug: r-bioc-biocparallel
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- sug: r-cran-covr
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- sug: r-cran-optparse
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- sug: r-cran-pscbs
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