套件：bedtools（2.30.0+dfsg-3）

[ 原始碼： bedtools  ]

suite of utilities for comparing genomic features

The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage. The utilities are largely based on four widely-used file formats: BED, GFF/GTF, VCF, and SAM/BAM. Using BEDTools, one can develop sophisticated pipelines that answer complicated research questions by streaming several BEDTools together.

The groupBy utility is distributed in the filo package.

標籤: 領域: 生物學, 生物資訊學, 實做語言: implemented-in::c++, interface::commandline, 角色: 程式, 範圍: 套裝軟體, Purpose: use::analysing, use::comparing, 資料轉換, use::filtering, works-with::biological-sequence

其他與 bedtools 有關的套件

• dep: libbz2-1.0

  high-quality block-sorting file compressor library - runtime

• dep: libc6 (>= 2.34)

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

• dep: libgcc-s1 (>= 3.0) [amd64, s390x]

  GCC 支援函式庫

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [arm64, mips64el, mipsel, ppc64el]

  dep: libgcc-s1 (>= 7) [i386]

• dep: liblzma5 (>= 5.1.1alpha+20120614)

  XZ-format compression library

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: zlib1g (>= 1:1.2.0)

  壓縮函式庫 - 跑程式時用(runtime)

下載 bedtools

下載可用於所有硬體架構的

硬體架構	套件大小	安裝後大小	檔案
amd64	649。1 kB	2，045。0 kB	[檔案列表]
arm64	567。0 kB	1，877。0 kB	[檔案列表]
armel	537。4 kB	1，748。0 kB	[檔案列表]
armhf	554。1 kB	1，260。0 kB	[檔案列表]
i386	717。1 kB	2，292。0 kB	[檔案列表]
mips64el	582。2 kB	2，601。0 kB	[檔案列表]
mipsel	601。8 kB	2，488。0 kB	[檔案列表]
ppc64el	666。0 kB	2，517。0 kB	[檔案列表]
s390x	567。4 kB	2，105。0 kB	[檔案列表]