[ 原始碼： r-bioc-tximeta ]
套件：r-bioc-tximeta（1.16.1+dfsg-1）
r-bioc-tximeta 的相關連結
Debian 的資源：
下載原始碼套件 r-bioc-tximeta：
- [r-bioc-tximeta_1.16.1+dfsg-1.dsc]
- [r-bioc-tximeta_1.16.1+dfsg.orig.tar.xz]
- [r-bioc-tximeta_1.16.1+dfsg-1.debian.tar.xz]
維護小組：
外部的資源：
- 主頁 [bioconductor.org]
相似套件：
Transcript Quantification Import with Automatic Metadata
Transcript quantification import from Salmon and alevin with automatic attachment of transcript ranges and release information, and other associated metadata. De novo transcriptomes can be linked to the appropriate sources with linkedTxomes and shared for computational reproducibility.
其他與 r-bioc-tximeta 有關的套件
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- dep: r-api-4.0
- 本虛擬套件由這些套件填實： r-base-core
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- dep: r-api-bioc-3.16
- 本虛擬套件由這些套件填實： r-bioc-biocgenerics
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- dep: r-base-core (>= 4.2.2.20221110-2)
- GNU R core of statistical computation and graphics system
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- dep: r-bioc-annotationdbi
- GNU R Annotation Database Interface for BioConductor
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- dep: r-bioc-annotationhub
- GNU R client to access AnnotationHub resources
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- dep: r-bioc-biocfilecache
- GNU R management of files across sessions
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- dep: r-bioc-biostrings
- GNU R string objects representing biological sequences
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- dep: r-bioc-ensembldb
- GNU R utilities to create and use an Ensembl based annotation database
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- dep: r-bioc-genomeinfodb
- BioConductor utilities for manipulating chromosome identifiers
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- dep: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
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- dep: r-bioc-genomicranges
- BioConductor representation and manipulation of genomic intervals
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- dep: r-bioc-iranges
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-s4vectors
- BioConductor S4 implementation of vectors and lists
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- dep: r-bioc-summarizedexperiment
- BioConductor assay container
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- dep: r-bioc-tximport
- transcript-level estimates for biological sequencing
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- dep: r-cran-jsonlite
- Robust, High Performance JSON Parser and Generator for R
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- dep: r-cran-matrix
- GNU R package of classes for dense and sparse matrices
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- dep: r-cran-tibble
- GNU R Simple Data Frames
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- sug: r-bioc-deseq2
- R package for RNA-Seq Differential Expression Analysis
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- sug: r-bioc-edger
- Empirical analysis of digital gene expression data in R
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- sug: r-bioc-fishpond
- Differential transcript and gene expression with inferential replicates
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- sug: r-bioc-limma
- linear models for microarray data
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- sug: r-bioc-tximportdata
- GNU R various transcript abundance quantifiers
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- sug: r-cran-devtools
- Tools to Make Developing R Packages Easier
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- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
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- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
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- sug: r-cran-testthat
- GNU R testsuite