软件包：phyx（1.3.1+ds-2 以及其他的）

[ 源代码： phyx  ]

UNIX-style phylogenetic analyses on trees and sequences

phyx provides a convenient, lightweight and inclusive toolkit consisting of programs spanning the wide breadth of programs utilized by researchers performing phylogenomic analyses. Modeled after Unix/GNU/Linux command line tools, individual programs perform a single task and operate on standard I/O streams. A result of this stream-centric approach is that, for most programs, only a single sequence or tree is in memory at any moment. Thus, large datasets can be processed with minimal memory requirements. phyx’s ever-growing complement of programs consists of over 35 programs focused on exploring, manipulating, analyzing and simulating phylogenetic objects (alignments, trees and MCMC logs). As with standard Unix command line tools, these programs can be piped (together with non-phyx tools), allowing the easy construction of efficient analytical pipelines.

其他与 phyx 有关的软件包

• dep: libarmadillo12 (>= 1:12.6.1+dfsg) [除 riscv64, sparc64]

  streamlined C++ linear algebra library

  dep: libarmadillo12 (>= 1:12.6.4+dfsg) [sparc64]

  dep: libarmadillo12 (>= 1:12.6.7+dfsg) [riscv64]

• dep: libblas3 [sparc64]

  Basic Linear Algebra Reference implementations, shared library

  或者 libblas.so.3

  本虚包由这些包填实： libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libc6 (>= 2.34) [除 alpha, sh4]

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6.1-udeb

• dep: libgcc-s1 (>= 4.0) [除 arm64, hppa, i386, m68k, mips64el, riscv64, sh4]

  GCC 支持库

  dep: libgcc-s1 (>= 4.2) [i386, sh4]

  dep: libgcc-s1 (>= 4.5) [arm64, mips64el, riscv64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC 支持库

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC 支持库

• dep: libgomp1 (>= 4.9)

  GCC OpenMP（GOMP）支持库

• dep: liblapack3 [sparc64]

  Library of linear algebra routines 3 - shared version

  或者 liblapack.so.3

  本虚包由这些包填实： libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libnlopt0 (>= 2.6.1)

  nonlinear optimization library

• dep: libstdc++6 (>= 13.1) [除 alpha]

  GNU 标准 C++ 库，第3版

  dep: libstdc++6 (>= 13.2.0-2) [alpha]

• dep: python3

  交互式高级面向对象语言（默认 python3 版本）

下载 phyx

下载可用于所有硬件架构的

硬件架构	版本	软件包大小	安装后大小	文件
alpha （非官方移植版）	1.3.1+ds-2+b1	2,174.1 kB	23,920.0 kB	[文件列表]
amd64	1.3.1+ds-2+b1	2,221.7 kB	20,547.0 kB	[文件列表]
arm64	1.3.1+ds-2+b1	2,072.8 kB	20,811.0 kB	[文件列表]
armel	1.3.1+ds-2+b1	1,821.2 kB	18,150.0 kB	[文件列表]
armhf	1.3.1+ds-2+b1	1,778.4 kB	12,934.0 kB	[文件列表]
hppa （非官方移植版）	1.3.1+ds-2+b1	1,952.2 kB	18,577.0 kB	[文件列表]
i386	1.3.1+ds-2+b1	2,358.6 kB	21,466.0 kB	[文件列表]
m68k （非官方移植版）	1.3.1+ds-2+b1	2,064.4 kB	19,354.0 kB	[文件列表]
mips64el	1.3.1+ds-2+b1	2,184.3 kB	26,333.0 kB	[文件列表]
ppc64 （非官方移植版）	1.3.1+ds-2+b1	2,149.0 kB	26,763.0 kB	[文件列表]
ppc64el	1.3.1+ds-2+b1	2,148.8 kB	25,099.0 kB	[文件列表]
riscv64	1.3.1+ds-2+b1	2,080.8 kB	15,663.0 kB	[文件列表]
s390x	1.3.1+ds-2+b1	2,089.5 kB	21,411.0 kB	[文件列表]
sh4 （非官方移植版）	1.3.1+ds-2+b1	2,204.1 kB	20,189.0 kB	[文件列表]
sparc64 （非官方移植版）	1.3.1+ds-2	2,101.7 kB	52,823.0 kB	[文件列表]
x32 （非官方移植版）	1.3.1+ds-2+b1	2,183.2 kB	19,418.0 kB	[文件列表]