[ 源代码: ggd-utils ]
软件包:ggd-utils(1.0.0+ds-1 以及其他的)
programs for use in ggd
Takes a genome file and (currently) a .vcf.gz or a .bed.gz and checks that:
* a .tbi is present * the VCF has ""##fileformat=VCF" as the first line * the VCF has a #CHROM header * the chromosome are in the order specified by the genome file (and present) * the positions are sorted * the positions are <= the chromosome lengths defined in the genome file.
As a result, any new genome going into GGD will have a .genome file that will dictate the sort order and presence or absence of the 'chr' prefix for chromosomes
其他与 ggd-utils 有关的软件包
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- dep: libc6 (>= 2.34) [除 alpha]
- GNU C 语言运行库:共享库
同时作为一个虚包由这些包填实: libc6-udeb
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- dep: libc6.1 (>= 2.34) [alpha]
- GNU C 语言运行库:共享库
同时作为一个虚包由这些包填实: libc6.1-udeb
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- dep: libgcc-s1 (>= 3.3.1) [ppc64, x32]
- GCC 支持库
- dep: libgcc-s1 (>= 3.4) [alpha, sparc64]
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- dep: libgo22 [alpha, ppc64, sparc64, x32]
- Runtime library for GNU Go applications
下载 ggd-utils
硬件架构 | 版本 | 软件包大小 | 安装后大小 | 文件 |
---|---|---|---|---|
alpha (非官方移植版) | 1.0.0+ds-1+b9 | 190.5 kB | 759.0 kB | [文件列表] |
amd64 | 1.0.0+ds-1+b9 | 1,842.4 kB | 5,300.0 kB | [文件列表] |
arm64 | 1.0.0+ds-1+b9 | 1,592.7 kB | 5,036.0 kB | [文件列表] |
armel | 1.0.0+ds-1+b9 | 1,574.9 kB | 5,179.0 kB | [文件列表] |
armhf | 1.0.0+ds-1+b9 | 1,568.2 kB | 5,155.0 kB | [文件列表] |
i386 | 1.0.0+ds-1+b9 | 1,700.6 kB | 5,195.0 kB | [文件列表] |
mips64el | 1.0.0+ds-1+b9 | 1,439.4 kB | 5,823.0 kB | [文件列表] |
ppc64 (非官方移植版) | 1.0.0+ds-1+b9 | 219.6 kB | 1,088.0 kB | [文件列表] |
ppc64el | 1.0.0+ds-1+b9 | 1,584.2 kB | 5,163.0 kB | [文件列表] |
riscv64 (非官方移植版) | 1.0.0+ds-1+b6 | 1,529.0 kB | 4,886.0 kB | [文件列表] |
s390x | 1.0.0+ds-1+b9 | 1,685.1 kB | 5,556.0 kB | [文件列表] |
sparc64 (非官方移植版) | 1.0.0+ds-1+b8 | 187.8 kB | 1,274.0 kB | [文件列表] |
x32 (非官方移植版) | 1.0.0+ds-1+b9 | 199.3 kB | 716.0 kB | [文件列表] |