软件包：libjellyfish-2.0-dev（2.3.1-3 以及其他的）

[ 源代码： jellyfish  ]

count k-mers in DNA sequences (development files of jellyfish)

JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.

JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.

This package contains the development files (static library and header files)

标签: 软件开发: 函数库, 角色: 开发用函数库

其他与 libjellyfish-2.0-dev 有关的软件包

• dep: libjellyfish-2.0-2 (= 2.3.0-12) [ia64]

  count k-mers in DNA sequences (dynamic library of jellyfish)

  dep: libjellyfish-2.0-2 (= 2.3.1-2+b1) [hppa]

  dep: libjellyfish-2.0-2 (= 2.3.1-3+b3) [amd64, arm64]

  dep: libjellyfish-2.0-2 (= 2.3.1-3+b4) [mips64el, ppc64el, riscv64]

下载 libjellyfish-2.0-dev

下载可用于所有硬件架构的

硬件架构	版本	软件包大小	安装后大小	文件
amd64	2.3.1-3+b3	134.8 kB	691.0 kB	[文件列表]
arm64	2.3.1-3+b3	132.8 kB	694.0 kB	[文件列表]
hppa （非官方移植版）	2.3.1-2+b1	134.3 kB	627.0 kB	[文件列表]
ia64 （非官方移植版）	2.3.0-12	150.5 kB	825.0 kB	[文件列表]
mips64el	2.3.1-3+b4	140.4 kB	777.0 kB	[文件列表]
ppc64el	2.3.1-3+b4	140.9 kB	725.0 kB	[文件列表]
riscv64	2.3.1-3+b4	265.7 kB	2,255.0 kB	[文件列表]