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[ 源代码: seqmagick  ]

软件包:seqmagick(0.7.0-1)

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imagemagick-like frontend to Biopython SeqIO

Seqmagick is a little utility to expose the file format conversion in BioPython in a convenient way.

Features include:

 * Modifying sequences:
   - Remove gaps
   - Reverse & reverse complement
   - Trim to a range of residues
   - Change case
   - Sort by length or ID
 * Displaying information about sequence files
 * Subsetting sequence files by:
   - Position
   - ID
   - Deduplication
 * Filtering sequences by quality score
 * Trimming alignments to a region of interest defined by the forward
   and reverse primers

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