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[ 源代码: r-cran-ape  ]

软件包:r-cran-ape(5.3-1 以及其他的)

r-cran-ape 的相关链接

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Debian 的资源:

下载源码包 r-cran-ape

维护小组:

外部的资源:

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GNU R package for Analyses of Phylogenetics and Evolution

This package provides functions for reading, writing, plotting, and manipulating phylogenetic trees, analyses of comparative data in a phylogenetic framework, ancestral character analyses, analyses of diversification and macroevolution, computing distances from DNA sequences, reading and writing nucleotide sequences as well as importing from BioConductor, and several tools such as Mantel's test, generalized skyline plots, graphical exploration of phylogenetic data (alex, trex, kronoviz), estimation of absolute evolutionary rates and clock-like trees using mean path lengths and penalized likelihood, dating trees with non-contemporaneous sequences, translating DNA into AA sequences, and assessing sequence alignments. Phylogeny estimation can be done with the NJ, BIONJ, ME, MVR, SDM, and triangle methods, and several methods handling incomplete distance matrices (NJ*, BIONJ*, MVR*, and the corresponding triangle method). Some functions call external applications (PhyML, Clustal, T-Coffee, Muscle) whose results are returned into R.

标签: 软件开发: GNU 开发, 领域: 统计学, 实做语言: GNU R

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下载 r-cran-ape

下载可用于所有硬件架构的
硬件架构 版本 软件包大小 安装后大小 文件
alpha (非官方移植版) 5.3-1 2,140.1 kB2,530.0 kB [文件列表]
amd64 5.3-1 2,136.0 kB2,477.0 kB [文件列表]
arm64 5.3-1 2,121.0 kB2,449.0 kB [文件列表]
armel 5.3-1 2,129.1 kB2,462.0 kB [文件列表]
armhf 5.3-1 2,118.1 kB2,371.0 kB [文件列表]
hppa (非官方移植版) 5.3-1 2,138.0 kB2,493.0 kB [文件列表]
i386 5.3-1 2,141.0 kB2,486.0 kB [文件列表]
m68k (非官方移植版) 5.3-1 2,126.7 kB2,440.0 kB [文件列表]
mips 5.3-1 2,127.1 kB2,481.0 kB [文件列表]
mips64el 5.3-1 2,125.5 kB2,496.0 kB [文件列表]
mipsel 5.3-1 2,129.3 kB2,482.0 kB [文件列表]
powerpcspe (非官方移植版) 5.2-1 2,106.9 kB2,434.0 kB [文件列表]
ppc64 (非官方移植版) 5.3-1 2,143.9 kB2,606.0 kB [文件列表]
ppc64el 5.3-1 2,139.4 kB2,537.0 kB [文件列表]
riscv64 (非官方移植版) 5.3-1 2,127.1 kB2,409.0 kB [文件列表]
s390x 5.3-1 2,127.3 kB2,497.0 kB [文件列表]
sh4 (非官方移植版) 5.3-1 2,152.9 kB2,449.0 kB [文件列表]
sparc64 (非官方移植版) 5.3-1 2,118.8 kB2,466.0 kB [文件列表]
x32 (非官方移植版) 5.3-1 2,143.5 kB2,471.0 kB [文件列表]