[ 源代码： python-pyfaidx ]
软件包：python-pyfaidx-examples（0.8.1.1-1）
python-pyfaidx-examples 的相关链接
Debian 的资源：
下载源码包 python-pyfaidx：
- [python-pyfaidx_0.8.1.1-1.dsc]
- [python-pyfaidx_0.8.1.1.orig.tar.gz]
- [python-pyfaidx_0.8.1.1-1.debian.tar.xz]
维护小组：
外部的资源：
- 主页 [github.com]
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example data for efficient random access to fasta subsequences for Python
Samtools provides a function "faidx" (FAsta InDeX), which creates a small flat index file ".fai" allowing for fast random access to any subsequence in the indexed FASTA file, while loading a minimal amount of the file in to memory. This Python module implements pure Python classes for indexing, retrieval, and in-place modification of FASTA files using a samtools compatible index. The pyfaidx module is API compatible with the pygr seqdb module. A command-line script "faidx" is installed alongside the pyfaidx module, and facilitates complex manipulation of FASTA files without any programming knowledge.
This package provides example data to test the Python modules.
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- sug: python3-pyfaidx
- efficient random access to fasta subsequences for Python 3