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[ 源代码: zalign  ]

软件包:zalign(0.9.1-4)

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parallel local alignment of biological sequences

zAlign is a local sequence aligner, especially intended for use with large biological DNA sequences, with more than 1Mbp (Millions of base pairs). It uses the Smith-Waterman exact algorithm with affine gap cost function to perform this task.

zAlign can be used both in distributed (clusters, for example) or standalone environments. Currently it has been tested on Linux and Sun Solaris, using both the MPICH (http://www.mcs.anl.gov/research/projects/mpi/mpich1/) and OpenMPI (http://www.open-mpi.org/) implementations. Ports for other Unix-like environments are highly considered.

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下载 zalign

下载可用于所有硬件架构的
硬件架构 软件包大小 安装后大小 文件
amd64 47.1 kB279.0 kB [文件列表]
arm64 44.7 kB263.0 kB [文件列表]
armel 25.3 kB117.0 kB [文件列表]
armhf 26.1 kB97.0 kB [文件列表]
i386 47.9 kB265.0 kB [文件列表]
mips 47.8 kB318.0 kB [文件列表]
mips64el 50.7 kB558.0 kB [文件列表]
mipsel 49.1 kB318.0 kB [文件列表]
ppc64el 49.9 kB415.0 kB [文件列表]
s390x 46.0 kB295.0 kB [文件列表]