软件包：nanopolish（0.13.2-3）

[ 源代码： nanopolish  ]

consensus caller for nanopore sequencing data

Nanopolish uses a signal-level hidden Markov model for consensus calling of nanopore genome sequencing data. It can perform signal-level analysis of Oxford Nanopore sequencing data. Nanopolish can calculate an improved consensus sequence for a draft genome assembly, detect base modifications, call SNPs and indels with respect to a reference genome and more.

其他与 nanopolish 有关的软件包

• dep: libc6 (>= 2.29)

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• dep: libgcc-s1 (>= 3.3.1) [除 armel, armhf, mipsel, ppc64el]

  GCC 支持库

  dep: libgcc-s1 (>= 3.4.4) [ppc64el]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [mipsel]

• dep: libgomp1 (>= 6)

  GCC OpenMP（GOMP）支持库

• dep: libhdf5-103-1

  HDF5 C runtime files - serial version

• dep: libhts3 (>= 1.10)

  C library for high-throughput sequencing data formats

• dep: libstdc++6 (>= 9)

  GNU 标准 C++ 库，第3版

• dep: perl

  拉里 沃尔的实用报表提取语言(Perl)

• dep: python3

  交互式高级面向对象语言（默认 python3 版本）

• dep: zlib1g (>= 1:1.1.4) [除 arm64]

  压缩库 - 运行时

  dep: zlib1g (>= 1:1.2.3.3) [arm64]

• rec: python3-biopython

  Python3 library for bioinformatics

• rec: python3-pysam

  interface for the SAM/BAM sequence alignment and mapping format (Python 3)

• sug: make

  utility for directing compilation

• sug: perl

  拉里 沃尔的实用报表提取语言(Perl)

下载 nanopolish

下载可用于所有硬件架构的

硬件架构	软件包大小	安装后大小	文件
amd64	2,199.8 kB	9,539.0 kB	[文件列表]
arm64	2,130.2 kB	9,334.0 kB	[文件列表]
armel	2,126.7 kB	9,405.0 kB	[文件列表]
armhf	2,141.1 kB	8,985.0 kB	[文件列表]
i386	2,247.0 kB	9,797.0 kB	[文件列表]
mips64el	2,140.4 kB	9,757.0 kB	[文件列表]
mipsel	2,163.9 kB	9,796.0 kB	[文件列表]
ppc64el	2,202.2 kB	9,795.0 kB	[文件列表]
s390x	2,134.3 kB	9,626.0 kB	[文件列表]