全部搜索项
buster  ] [  bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ 源代码: pirs  ]

软件包:pirs-examples(2.0.2+dfsg-9)

pirs-examples 的相关链接

Screenshot

Debian 的资源:

下载源码包 pirs

维护小组:

外部的资源:

相似软件包:

profile basd Illumina pair-end Reads Simulator (example data)

The program pIRS can be used for simulating Illumina PE reads, with a series of characters generated by Illumina sequencing platform, such as insert size distribution, sequencing error(substitution, insertion, deletion), quality score and GC content-coverage bias.

The insert size follows a normal distribution, so users should set the mean value and standard deviation. Usually the standard deviation is set as 1/20 of the mean value. The normal distribution by Box-Muller method is simulated.

The program simulates sequencing error, quality score and GC content- coverage bias according to the empirical distribution profile. Some default profiles counted from lots of real sequencing data are provided.

To simulate reads from diploid genome, users should simulate the diploid genome sequence firstly by setting the ratio of heterozygosis SNP, heterozygosis InDel and structure variation.

This package contains some example data.

下载 pirs-examples

下载可用于所有硬件架构的
硬件架构 软件包大小 安装后大小 文件
all 1,903.2 kB1,913.0 kB [文件列表]