[ 源代码： mmseqs2 ]
软件包：mmseqs2（12-113e3+ds-3 以及其他的）
ultra fast and sensitive protein search and clustering
MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge proteins/nucleotide sequence sets. MMseqs2 is open source GPL-licensed software implemented in C++ for Linux, MacOS, and (as beta version, via cygwin) Windows. The software is designed to run on multiple cores and servers and exhibits very good scalability. MMseqs2 can run 10000 times faster than BLAST. At 100 times its speed it achieves almost the same sensitivity. It can perform profile searches with the same sensitivity as PSI-BLAST at over 400 times its speed.
其他与 mmseqs2 有关的软件包
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- dep: libbz2-1.0
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- dep: libc6 (>= 2.29)
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同时作为一个虚包由这些包填实： libc6-udeb
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- dep: libgcc-s1 (>= 4.2)
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- dep: libgomp1 (>= 6)
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- dep: libgzstream0 (>= 1.5+dfsg)
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- dep: libstdc++6 (>= 9)
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- dep: zlib1g (>= 1:1.1.4)
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